Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase/3-oxoadipate enol-lactonase,tigr02427 | SAMN04244553_1469 | Not Available | Negative | 1334357 - 1336564 | 76277.9 |
| protocatechuate 3,4-dioxygenase alpha subunit | SAMN04244553_1470 | Not Available | Negative | 1336557 - 1337102 | 19964.6 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN04244553_1471 | Not Available | Negative | 1337095 - 1337823 | 27306.9 |
| glutaconate coa-transferase subunit b | SAMN04244553_1472 | Not Available | Negative | 1337823 - 1338575 | 25917.1 |
| glutaconate coa-transferase subunit a | SAMN04244553_1473 | Not Available | Negative | 1338572 - 1339387 | 29301.0 |
| p-hydroxybenzoate 3-monooxygenase | SAMN04244553_1474 | Not Available | Negative | 1339380 - 1340555 | 43085.0 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN04244553_1475 | Not Available | Positive | 1340720 - 1341943 | 42817.1 |
| dna-binding transcriptional regulator, padr family | SAMN04244553_1476 | Not Available | Positive | 1342049 - 1342645 | 22670.1 |
| protein of unknown function | SAMN04244553_1477 | Not Available | Positive | 1342649 - 1343128 | 17180.0 |
| hypothetical protein | SAMN04244553_1478 | Not Available | Negative | 1343135 - 1344148 | 36410.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

