Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, iclr family | SAMN04244553_1459 | Not Available | Negative | 1324140 - 1324910 | 27411.4 |
| hypothetical protein | SAMN04244553_1460 | Not Available | Positive | 1324994 - 1325872 | 31554.9 |
| major facilitator superfamily protein | SAMN04244553_1461 | Not Available | Positive | 1326002 - 1327345 | 46684.7 |
| mspa protein | SAMN04244553_1462 | Not Available | Positive | 1327435 - 1328088 | 21398.1 |
| mspa protein | SAMN04244553_1463 | Not Available | Positive | 1328158 - 1328820 | 21925.6 |
| fatty-acyl-coa synthase | SAMN04244553_1464 | Not Available | Negative | 1329405 - 1330910 | 53103.6 |
| trans-feruloyl-coa hydratase / vanillin synthase | SAMN04244553_1465 | Not Available | Negative | 1330925 - 1331767 | 31085.8 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_1466 | Not Available | Negative | 1331874 - 1332467 | 21834.7 |
| acyl-coa reductase | SAMN04244553_1467 | Not Available | Positive | 1332529 - 1333920 | 46893.7 |
| 4-carboxymuconolactone decarboxylase | SAMN04244553_1468 | Not Available | Negative | 1333984 - 1334367 | 13606.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

