Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04244553_1425 | Not Available | Positive | 1297223 - 1297882 | 21937.6 |
| protein of unknown function | SAMN04244553_1426 | Not Available | Positive | 1297948 - 1298166 | 8176.14 |
| l,d-transpeptidase catalytic domain | SAMN04244553_1428 | Not Available | Negative | 1298537 - 1299064 | 19026.1 |
| beta-glucosidase | SAMN04244553_1429 | Not Available | Positive | 1299431 - 1300753 | 49082.4 |
| alpha/beta hydrolase fold | SAMN04244553_1430 | Not Available | Negative | 1300826 - 1302355 | 54574.1 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04244553_1431 | Not Available | Positive | 1302660 - 1303127 | 16653.7 |
| catalase-peroxidase | SAMN04244553_1432 | Not Available | Positive | 1303161 - 1305392 | 81520.8 |
| hypothetical protein | SAMN04244553_1433 | Not Available | Positive | 1305512 - 1306291 | 27227.3 |
| hypothetical protein | SAMN04244553_1434 | Not Available | Negative | 1306307 - 1307029 | 25849.7 |
| transcriptional regulator, tetr family | SAMN04244553_1435 | Not Available | Positive | 1307217 - 1307714 | 17547.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

