Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_1414 | Not Available | Positive | 1285492 - 1286112 | 21394.0 |
| rhodanese-related sulfurtransferase | SAMN04244553_1415 | Not Available | Negative | 1286118 - 1286792 | 23809.5 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_1416 | Not Available | Positive | 1286901 - 1288166 | 41088.7 |
| hypothetical protein | SAMN04244553_1418 | Not Available | Positive | 1288635 - 1289459 | 29094.3 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_1419 | Not Available | Positive | 1289583 - 1290971 | 48853.6 |
| hypothetical protein | SAMN04244553_1420 | Not Available | Positive | 1291323 - 1291802 | 17736.9 |
| tryptophan synthase beta chain | SAMN04244553_1421 | Not Available | Positive | 1291931 - 1293187 | 44613.6 |
| hypothetical protein | SAMN04244553_1422 | Not Available | Positive | 1293268 - 1294395 | 39971.4 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04244553_1423 | Not Available | Positive | 1294639 - 1296093 | 53378.4 |
| b12 binding domain-containing protein | SAMN04244553_1424 | Not Available | Negative | 1296097 - 1297068 | 33798.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

