Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_1394 | Not Available | Negative | 1245279 - 1245398 | 4395.1 |
| gmp synthase - glutamine amidotransferase | SAMN04244553_1395 | Not Available | Negative | 1245395 - 1246102 | 24477.2 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_1396 | Not Available | Positive | 1246298 - 1246918 | 22725.1 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN04244553_1397 | Not Available | Positive | 1247147 - 1249018 | 68663.4 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN04244553_1398 | Not Available | Positive | 1249188 - 1250378 | 42636.9 |
| conserved hypothetical integral membrane protein | SAMN04244553_1399 | Not Available | Negative | 1250442 - 1251500 | 36116.4 |
| hypothetical protein | SAMN04244553_1400 | Not Available | Negative | 1251599 - 1252369 | 25604.7 |
| 3-oxoacid coa-transferase subunit b | SAMN04244553_1401 | Not Available | Negative | 1252439 - 1253110 | 23391.4 |
| 3-oxoacid coa-transferase subunit a | SAMN04244553_1402 | Not Available | Negative | 1253112 - 1253876 | 26790.8 |
| hypothetical protein | SAMN04244553_1403 | Not Available | Negative | 1253873 - 1254466 | 21222.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

