Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chat domain-containing protein | SAMN04244553_1363 | Not Available | Negative | 1194339 - 1196408 | 77267.5 |
| ricin-type beta-trefoil lectin domain-containing protein | SAMN04244553_1364 | Not Available | Negative | 1196632 - 1198989 | 85955.1 |
| hypothetical protein | SAMN04244553_1365 | Not Available | Negative | 1199387 - 1201069 | 60672.3 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04244553_1366 | Not Available | Negative | 1201501 - 1202208 | 25151.6 |
| hypothetical protein | SAMN04244553_1367 | Not Available | Positive | 1202845 - 1203507 | 23872.2 |
| transcriptional regulator, tetr family | SAMN04244553_1368 | Not Available | Positive | 1204112 - 1204750 | 23528.4 |
| long-chain acyl-coa synthetase | SAMN04244553_1369 | Not Available | Negative | 1204766 - 1206262 | 53423.8 |
| hypothetical protein | SAMN04244553_1370 | Not Available | Negative | 1206396 - 1207091 | 23237.3 |
| sugar transporter | SAMN04244553_1371 | Not Available | Negative | 1207206 - 1208594 | 49026.4 |
| non-specific serine/threonine protein kinase | SAMN04244553_1372 | Not Available | Negative | 1209213 - 1212500 | 118969.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

