Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN04244553_0239 | Not Available | Negative | 38802 - 39959 | 42094.0 |
| hypothetical protein | SAMN04244553_0240 | Not Available | Negative | 40055 - 40813 | 25141.5 |
| branched-chain amino acid transport system substrate-binding protein | SAMN04244553_0241 | Not Available | Negative | 40893 - 42143 | 44854.6 |
| branched-chain amino acid transport system permease protein | SAMN04244553_0242 | Not Available | Negative | 42133 - 43194 | 37459.7 |
| branched-chain amino acid transport system permease protein | SAMN04244553_0243 | Not Available | Negative | 43191 - 44072 | 30297.0 |
| branched-chain amino acid transport system atp-binding protein | SAMN04244553_0244 | Not Available | Negative | 44075 - 44800 | 26171.7 |
| branched-chain amino acid transport system atp-binding protein | SAMN04244553_0245 | Not Available | Negative | 44797 - 45555 | 27253.2 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN04244553_0246 | Not Available | Positive | 45781 - 47064 | 45829.8 |
| long-chain acyl-coa synthetase | SAMN04244553_0247 | Not Available | Positive | 47146 - 48627 | 52566.1 |
| anti-anti-sigma factor | SAMN04244553_0248 | Not Available | Positive | 48930 - 49331 | 14448.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

