Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_1332 | Not Available | Positive | 1164497 - 1165294 | 27474.3 |
| transcriptional regulator, tetr family | SAMN04244553_1333 | Not Available | Negative | 1165904 - 1166527 | 22849.4 |
| probable f420-dependent oxidoreductase, rv2161c family | SAMN04244553_1334 | Not Available | Positive | 1166675 - 1167550 | 31827.8 |
| fructosamine-3-kinase | SAMN04244553_1335 | Not Available | Positive | 1167580 - 1168425 | 29912.7 |
| helix-turn-helix domain-containing protein | SAMN04244553_1336 | Not Available | Negative | 1168427 - 1169206 | 28524.3 |
| hypothetical protein | SAMN04244553_1337 | Not Available | Negative | 1169263 - 1169622 | 12725.2 |
| hypothetical protein | SAMN04244553_1338 | Not Available | Negative | 1169974 - 1170672 | 23247.9 |
| cubico group peptidase, beta-lactamase class c family | SAMN04244553_1339 | Not Available | Positive | 1170854 - 1172443 | 55581.2 |
| protein of unknown function | SAMN04244553_1340 | Not Available | Negative | 1172450 - 1172959 | 18862.8 |
| hypothetical protein | SAMN04244553_1341 | Not Available | Positive | 1173125 - 1173496 | 12965.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

