Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_1322 | Not Available | Negative | 1153951 - 1154130 | 5758.3 |
| hypothetical protein | SAMN04244553_1323 | Not Available | Negative | 1154394 - 1154828 | 16002.1 |
| long-chain alpha-pyrone synthase | SAMN04244553_1324 | Not Available | Negative | 1154943 - 1156106 | 40790.0 |
| phosphoribosylanthranilate isomerase | SAMN04244553_1325 | Not Available | Negative | 1156239 - 1156850 | 21025.0 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_1326 | Not Available | Positive | 1157022 - 1158656 | 55695.1 |
| hypothetical protein | SAMN04244553_1327 | Not Available | Negative | 1158679 - 1159398 | 25862.0 |
| lexa-binding, inner membrane-associated putative hydrolase | SAMN04244553_1328 | Not Available | Positive | 1159693 - 1160439 | 26473.5 |
| sugar lactone lactonase yvre | SAMN04244553_1329 | Not Available | Positive | 1161002 - 1162006 | 36128.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_1330 | Not Available | Positive | 1162052 - 1163302 | 44264.3 |
| hypothetical protein | SAMN04244553_1331 | Not Available | Negative | 1163311 - 1164402 | 39357.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

