Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | SAMN04244553_1311 | Not Available | Negative | 1142245 - 1143006 | 27119.7 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04244553_1312 | Not Available | Negative | 1143009 - 1144265 | 45262.5 |
| cyclase | SAMN04244553_1313 | Not Available | Negative | 1144253 - 1145179 | 32336.5 |
| aromatase | SAMN04244553_1314 | Not Available | Negative | 1145176 - 1146111 | 34368.4 |
| act minimal pks acyl carrier protein | SAMN04244553_1315 | Not Available | Negative | 1146182 - 1146442 | 9408.27 |
| act minimal pks chain-length factor (clf/ks beta) | SAMN04244553_1316 | Not Available | Negative | 1146439 - 1147677 | 42699.6 |
| act minimal pks ketosynthase (ks/ks alpha) | SAMN04244553_1317 | Not Available | Negative | 1147674 - 1148942 | 45041.3 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN04244553_1318 | Not Available | Positive | 1149144 - 1150832 | 59262.8 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN04244553_1319 | Not Available | Positive | 1150844 - 1152193 | 48015.4 |
| dna-binding transcriptional activator of the sarp family | SAMN04244553_1320 | Not Available | Negative | 1152235 - 1153104 | 32367.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

