Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | SAMN04244553_1269 | Not Available | Positive | 1105437 - 1106021 | 21043.2 |
| conserved hypothetical protein | SAMN04244553_1270 | Not Available | Positive | 1106023 - 1106832 | 29196.8 |
| predicted oxidoreductase | SAMN04244553_1271 | Not Available | Positive | 1106898 - 1107887 | 35940.7 |
| l-cysteine:1d-myo-inositol 2-amino-2-deoxy-alpha-d-glucopyranoside ligase | SAMN04244553_1272 | Not Available | Positive | 1108151 - 1109389 | 45174.9 |
| metallo-beta-lactamase superfamily protein | SAMN04244553_1273 | Not Available | Positive | 1109557 - 1110570 | 36305.8 |
| zinc transporter zupt | SAMN04244553_1274 | Not Available | Negative | 1110677 - 1111885 | 41229.2 |
| multicopper oxidase | SAMN04244553_1275 | Not Available | Negative | 1111885 - 1112931 | 38296.3 |
| long-chain acyl-coa synthetase (amp-forming) | SAMN04244553_1276 | Not Available | Negative | 1113043 - 1114860 | 64972.2 |
| protein of unknown function | SAMN04244553_1277 | Not Available | Positive | 1115072 - 1115653 | 21692.2 |
| hypothetical protein | SAMN04244553_1278 | Not Available | Positive | 1115786 - 1116151 | 12271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

