Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_1259 | Not Available | Positive | 1095493 - 1095849 | 12570.8 |
| hypothetical protein | SAMN04244553_1260 | Not Available | Positive | 1095856 - 1096392 | 18742.0 |
| putative drug exporter of the rnd superfamily | SAMN04244553_1261 | Not Available | Positive | 1096408 - 1098501 | 74284.9 |
| protein of unknown function | SAMN04244553_1262 | Not Available | Positive | 1098507 - 1098875 | 12986.4 |
| iron complex transport system atp-binding protein | SAMN04244553_1263 | Not Available | Negative | 1098907 - 1099740 | 29144.9 |
| iron complex transport system permease protein | SAMN04244553_1264 | Not Available | Negative | 1099964 - 1101136 | 39541.8 |
| iron complex transport system substrate-binding protein | SAMN04244553_1265 | Not Available | Negative | 1101133 - 1102173 | 34731.7 |
| predicted oxidoreductase | SAMN04244553_1266 | Not Available | Negative | 1102286 - 1103251 | 33500.7 |
| undecaprenyl-diphosphatase | SAMN04244553_1267 | Not Available | Positive | 1103472 - 1104416 | 33744.4 |
| probable phosphomutase, msmeg_4193 family | SAMN04244553_1268 | Not Available | Positive | 1104607 - 1105347 | 26437.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

