Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_0229 | Not Available | Negative | 29353 - 30114 | 27306.3 |
| hypothetical protein | SAMN04244553_0230 | Not Available | Positive | 30239 - 30586 | 12237.6 |
| transcriptional regulator, tetr family | SAMN04244553_0231 | Not Available | Negative | 30692 - 31261 | 20343.2 |
| acetyl-coa c-acetyltransferase | SAMN04244553_0232 | Not Available | Negative | 31315 - 32526 | 42030.4 |
| hypothetical protein | SAMN04244553_0233 | Not Available | Negative | 32549 - 33703 | 40503.5 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN04244553_0234 | Not Available | Negative | 33687 - 35228 | 53964.8 |
| enoyl-coa hydratase/carnithine racemase | SAMN04244553_0235 | Not Available | Negative | 35228 - 36013 | 27284.8 |
| glutaconate coa-transferase subunit b | SAMN04244553_0236 | Not Available | Negative | 36057 - 36842 | 27422.9 |
| glutaconate coa-transferase subunit a | SAMN04244553_0237 | Not Available | Negative | 36842 - 37774 | 34317.8 |
| dna-binding transcriptional regulator, lysr family | SAMN04244553_0238 | Not Available | Positive | 37881 - 38795 | 32496.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

