Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gas vesicle synthesis protein gvpl/gvpf | SAMN04244553_1239 | Not Available | Negative | 1078121 - 1078912 | 28655.7 |
| gas vesicle protein | SAMN04244553_1240 | Not Available | Negative | 1078912 - 1079310 | 13990.7 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04244553_1241 | Not Available | Negative | 1079307 - 1080509 | 44869.6 |
| hypothetical protein | SAMN04244553_1242 | Not Available | Negative | 1080515 - 1081120 | 21330.4 |
| hypothetical protein | SAMN04244553_1243 | Not Available | Positive | 1081543 - 1081848 | 10456.3 |
| protein of unknown function | SAMN04244553_1244 | Not Available | Positive | 1082645 - 1083079 | 16017.0 |
| hypothetical protein | SAMN04244553_1245 | Not Available | Positive | 1083165 - 1083497 | 12961.5 |
| protein of unknown function | SAMN04244553_1246 | Not Available | Negative | 1083862 - 1084284 | 14873.5 |
| interferon-induced transmembrane protein | SAMN04244553_1247 | Not Available | Negative | 1084281 - 1084787 | 17244.5 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN04244553_1248 | Not Available | Positive | 1085105 - 1086466 | 49323.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

