Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomevalonate kinase | SAMN04244553_1209 | Not Available | Negative | 1052457 - 1053536 | 37263.7 |
| diphosphomevalonate decarboxylase | SAMN04244553_1210 | Not Available | Negative | 1053533 - 1054594 | 36817.5 |
| mevalonate kinase | SAMN04244553_1211 | Not Available | Negative | 1054638 - 1055630 | 33052.0 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN04244553_1212 | Not Available | Negative | 1055793 - 1056629 | 30756.9 |
| fatty acid desaturase | SAMN04244553_1213 | Not Available | Negative | 1056620 - 1057636 | 38879.5 |
| hypothetical protein | SAMN04244553_1214 | Not Available | Negative | 1057698 - 1058963 | 43985.6 |
| geranylgeranyl pyrophosphate synthase | SAMN04244553_1215 | Not Available | Negative | 1058960 - 1060084 | 39930.3 |
| hypothetical protein | SAMN04244553_1216 | Not Available | Positive | 1061883 - 1062164 | 9897.53 |
| transcriptional regulator, contains xre-family hth domain | SAMN04244553_1217 | Not Available | Negative | 1062295 - 1063473 | 41863.0 |
| helix-turn-helix domain-containing protein | SAMN04244553_1218 | Not Available | Negative | 1063702 - 1064862 | 41451.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

