Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon monoxide dehydrogenase, large subunit apoprotein | SAMN04244553_1199 | Not Available | Negative | 1040093 - 1042483 | 85734.9 |
| carbon-monoxide dehydrogenase small subunit | SAMN04244553_1200 | Not Available | Negative | 1042480 - 1042998 | 18279.8 |
| carbon-monoxide dehydrogenase medium subunit | SAMN04244553_1201 | Not Available | Negative | 1043001 - 1043891 | 31540.9 |
| xanthine dehydrogenase accessory factor | SAMN04244553_1202 | Not Available | Negative | 1043970 - 1045106 | 39738.3 |
| dna-binding transcriptional regulator, lysr family | SAMN04244553_1203 | Not Available | Positive | 1045171 - 1046127 | 33868.0 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN04244553_1204 | Not Available | Negative | 1046084 - 1047352 | 44127.6 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_1205 | Not Available | Negative | 1047538 - 1049127 | 58830.8 |
| hydroxymethylglutaryl-coa synthase | SAMN04244553_1206 | Not Available | Negative | 1049136 - 1050308 | 42236.8 |
| 3-hydroxy-3-methylglutaryl-coenzyme a reductase | SAMN04244553_1207 | Not Available | Negative | 1050305 - 1051378 | 38511.0 |
| isopentenyl-diphosphate delta-isomerase | SAMN04244553_1208 | Not Available | Negative | 1051375 - 1052460 | 39004.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

