Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stas domain-containing protein | PLABR_RS04005 | Not Available | Negative | 926251 - 926625 | 13872.8 |
| duf3488 and duf4129 domain-containing transglutaminase family protein | PLABR_RS04010 | Not Available | Negative | 926663 - 929314 | 100059.0 |
| duf2254 domain-containing protein | PLABR_RS04015 | Not Available | Positive | 929547 - 930884 | 49113.4 |
| duf2007 domain-containing protein | PLABR_RS24410 | Not Available | Positive | 931064 - 931555 | 18357.3 |
| duf2007 domain-containing protein | PLABR_RS24415 | Not Available | Positive | 931790 - 932299 | 19067.2 |
| rep-associated tyrosine transposase | PLABR_RS25670 | Not Available | Positive | 932343 - 932978 | 24948.9 |
| hypothetical protein | PLABR_RS04035 | Not Available | Negative | 933073 - 933510 | 16064.2 |
| fad-dependent thymidylate synthase | PLABR_RS04040 | Not Available | Negative | 933600 - 934508 | 34775.3 |
| hypothetical protein | PLABR_RS24425 | Not Available | Positive | 934719 - 935591 | 33859.7 |
| permease | PLABR_RS04050 | Not Available | Positive | 935644 - 936897 | 44005.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
