Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | PLABR_RS03435 | Not Available | Negative | 798640 - 799758 | 41433.8 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | PLABR_RS03440 | Not Available | Negative | 800370 - 801830 | 55020.9 |
| hypothetical protein | PLABR_RS03445 | Not Available | Negative | 801920 - 802135 | 8398.28 |
| elongation factor p | PLABR_RS03450 | Not Available | Negative | 802238 - 802807 | 21145.9 |
| ef-p beta-lysylation protein epmb | PLABR_RS03455 | Not Available | Positive | 802997 - 804037 | 38743.8 |
| duf2293 domain-containing protein | PLABR_RS03460 | Not Available | Negative | 804340 - 805014 | 25224.1 |
| duf1559 domain-containing protein | PLABR_RS03465 | Not Available | Positive | 805431 - 806399 | 34984.1 |
| is5 family transposase | PLABR_RS03470 | Not Available | Negative | 806496 - 806850 | 13097.2 |
| hypothetical protein | PLABR_RS03475 | Not Available | Negative | 806891 - 807154 | 9999.8 |
| duf1080 domain-containing protein | PLABR_RS03480 | Not Available | Negative | 807260 - 807922 | 24769.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
