Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(46)-n7)-methyltransferase trmb | PLABR_RS03385 | Not Available | Negative | 786077 - 786748 | 25853.5 |
| zinc ribbon domain-containing protein | PLABR_RS03390 | Not Available | Negative | 786817 - 787038 | 8432.32 |
| slbb domain-containing protein | PLABR_RS03395 | Not Available | Positive | 787217 - 789250 | 72454.5 |
| hypothetical protein | PLABR_RS03400 | Not Available | Positive | 789302 - 790333 | 38087.3 |
| rhamnulokinase | PLABR_RS03405 | Not Available | Negative | 790343 - 791839 | 55039.6 |
| hpp family protein | PLABR_RS03410 | Not Available | Positive | 792172 - 792681 | 18835.6 |
| uracil-dna glycosylase | PLABR_RS03415 | Not Available | Negative | 792705 - 793694 | 35580.5 |
| duf6793 family protein | PLABR_RS03420 | Not Available | Positive | 794147 - 794470 | 12276.6 |
| protein translocase subunit secdf | PLABR_RS03425 | Not Available | Negative | 795112 - 798018 | 104872.0 |
| preprotein translocase subunit yajc | PLABR_RS03430 | Not Available | Negative | 798124 - 798504 | 14050.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
