Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa desaturase | PLABR_RS03280 | Not Available | Positive | 758404 - 759384 | 37154.4 |
| class i sam-dependent methyltransferase | PLABR_RS03285 | Not Available | Negative | 759509 - 760384 | 32711.5 |
| duf1844 domain-containing protein | PLABR_RS24375 | Not Available | Negative | 760436 - 760864 | 15384.2 |
| trna dihydrouridine synthase dusb | PLABR_RS03295 | Not Available | Negative | 761004 - 762134 | 41169.7 |
| thioredoxin family protein | PLABR_RS03300 | Not Available | Positive | 762467 - 763462 | 37642.6 |
| transcription termination factor rho | PLABR_RS03310 | Not Available | Positive | 765101 - 766687 | 57976.6 |
| hypothetical protein | PLABR_RS03315 | Not Available | Positive | 766717 - 767928 | 44823.7 |
| pspa/im30 family protein | PLABR_RS03320 | Not Available | Negative | 767919 - 768452 | 20082.2 |
| had family hydrolase | PLABR_RS03325 | Not Available | Positive | 768715 - 769395 | 25262.8 |
| 3-deoxy-d-manno-octulosonic acid transferase | PLABR_RS03330 | Not Available | Positive | 770015 - 771319 | 48850.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
