Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | PLABR_RS00095 | Not Available | Positive | 30829 - 32529 | 60682.3 |
| nucleoside hydrolase | PLABR_RS00100 | Not Available | Positive | 32648 - 33622 | 34402.6 |
| aldehyde dehydrogenase family protein | PLABR_RS00105 | Not Available | Positive | 33799 - 35235 | 52454.3 |
| metal abc transporter permease | PLABR_RS24185 | Not Available | Positive | 35622 - 36926 | 47024.8 |
| pyridoxine 5'-phosphate synthase | PLABR_RS00115 | Not Available | Positive | 37062 - 37802 | 27721.1 |
| hypothetical protein | PLABR_RS00120 | Not Available | Positive | 37811 - 38299 | 17355.8 |
| ribonuclease p protein component | PLABR_RS00125 | Not Available | Positive | 38296 - 38712 | 15946.4 |
| membrane protein insertion efficiency factor yidd | PLABR_RS00130 | Not Available | Positive | 38709 - 38948 | 9162.33 |
| rtcb family protein | PLABR_RS00135 | Not Available | Negative | 38984 - 40372 | 50200.6 |
| rep-associated tyrosine transposase | PLABR_RS00140 | Not Available | Negative | 40742 - 41260 | 20628.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
