Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | PLABR_RS02370 | Not Available | Positive | 554923 - 556260 | 48957.8 |
| 6-phosphofructokinase | PLABR_RS02375 | Not Available | Positive | 556564 - 557595 | 37046.7 |
| carboxypeptidase-like regulatory domain-containing protein | PLABR_RS02380 | Not Available | Negative | 558303 - 558812 | 17272.8 |
| shikimate kinase | PLABR_RS02385 | Not Available | Positive | 559039 - 559554 | 19288.0 |
| acyl-coa dehydrogenase family protein | PLABR_RS02390 | Not Available | Negative | 559558 - 561543 | 73242.8 |
| 2-isopropylmalate synthase | PLABR_RS02395 | Not Available | Positive | 562017 - 563555 | 56241.6 |
| helix-turn-helix transcriptional regulator | PLABR_RS02400 | Not Available | Positive | 563957 - 564259 | 11584.8 |
| hypothetical protein | PLABR_RS02405 | Not Available | Negative | 564487 - 564792 | 11590.7 |
| hypothetical protein | PLABR_RS02410 | Not Available | Positive | 565154 - 565564 | 15012.3 |
| ornithine cyclodeaminase family protein | PLABR_RS02415 | Not Available | Positive | 565643 - 566596 | 34647.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
