Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit gamma/tau | PLABR_RS25970 | Not Available | Negative | 5865216 - 5866997 | 64158.6 |
| 3-oxoacyl-acp synthase iii | PLABR_RS23710 | Not Available | Negative | 5867078 - 5868160 | 37987.7 |
| duf309 domain-containing protein | PLABR_RS23715 | Not Available | Negative | 5868442 - 5869002 | 20677.7 |
| duf1549 domain-containing protein | PLABR_RS23725 | Not Available | Positive | 5870040 - 5871719 | 64114.5 |
| duf1501 domain-containing protein | PLABR_RS23730 | Not Available | Positive | 5871815 - 5873086 | 46077.3 |
| sigma-70 family rna polymerase sigma factor | PLABR_RS23735 | Not Available | Positive | 5873280 - 5873960 | 25529.2 |
| duf1553 domain-containing protein | PLABR_RS23740 | Not Available | Positive | 5873957 - 5876230 | 83986.2 |
| diaminopimelate decarboxylase | PLABR_RS23745 | Not Available | Negative | 5876624 - 5877913 | 47077.0 |
| nipsnap family protein | PLABR_RS23750 | Not Available | Negative | 5878009 - 5878794 | 29989.4 |
| mmpl family transporter | PLABR_RS23755 | Not Available | Negative | 5878824 - 5881328 | 90935.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
