Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein cpab | PLABR_RS23545 | Not Available | Positive | 5826094 - 5827143 | 37779.5 |
| hypothetical protein | PLABR_RS23550 | Not Available | Positive | 5827289 - 5828536 | 44736.4 |
| cpaf family protein | PLABR_RS23555 | Not Available | Positive | 5828585 - 5829937 | 50071.1 |
| type ii secretion system f family protein | PLABR_RS23560 | Not Available | Positive | 5830063 - 5830923 | 31565.2 |
| type ii secretion system f family protein | PLABR_RS23565 | Not Available | Positive | 5831027 - 5832412 | 50557.6 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | PLABR_RS23570 | Not Available | Negative | 5832511 - 5833785 | 47300.9 |
| rna polymerase sigma factor | PLABR_RS23575 | Not Available | Negative | 5833918 - 5834502 | 22317.3 |
| radical sam protein | PLABR_RS23580 | Not Available | Negative | 5834604 - 5835464 | 31679.8 |
| hypothetical protein | PLABR_RS23585 | Not Available | Positive | 5835763 - 5836092 | 11527.5 |
| hypothetical protein | PLABR_RS23595 | Not Available | Positive | 5837286 - 5837615 | 11486.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
