Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching protein glgb | PLABR_RS22420 | Not Available | Negative | 5546202 - 5548241 | 77532.0 |
| plp-dependent aminotransferase family protein | PLABR_RS22425 | Not Available | Positive | 5548659 - 5549942 | 47253.4 |
| preq(1) synthase | PLABR_RS22430 | Not Available | Negative | 5550066 - 5550452 | 14692.2 |
| duf11 domain-containing protein | PLABR_RS22435 | Not Available | Negative | 5550559 - 5553903 | 116940.0 |
| sigma-70 family rna polymerase sigma factor | PLABR_RS22440 | Not Available | Positive | 5554400 - 5556067 | 64536.4 |
| duf1853 family protein | PLABR_RS22445 | Not Available | Positive | 5556249 - 5557151 | 35076.1 |
| hdod domain-containing protein | PLABR_RS22450 | Not Available | Negative | 5557172 - 5558968 | 66396.6 |
| transcriptional regulator nrdr | PLABR_RS22455 | Not Available | Negative | 5559296 - 5559766 | 18668.2 |
| glutamine-hydrolyzing gmp synthase | PLABR_RS22460 | Not Available | Positive | 5560048 - 5561643 | 59015.3 |
| ankyrin repeat domain-containing protein | PLABR_RS22465 | Not Available | Positive | 5561669 - 5562427 | 27357.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
