Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | PLABR_RS21805 | Not Available | Negative | 5400438 - 5401394 | 35641.9 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | PLABR_RS21810 | Not Available | Negative | 5401582 - 5402253 | 24648.5 |
| single-stranded-dna-specific exonuclease recj | PLABR_RS21815 | Not Available | Negative | 5402267 - 5404066 | 64689.3 |
| family 16 glycoside hydrolase | PLABR_RS21820 | Not Available | Positive | 5404423 - 5407692 | 121862.0 |
| phosphoenolpyruvate--protein phosphotransferase | PLABR_RS21825 | Not Available | Positive | 5407877 - 5409625 | 64857.1 |
| dihydrodipicolinate synthase family protein | PLABR_RS21830 | Not Available | Negative | 5409805 - 5410830 | 37845.3 |
| 3-deoxy-7-phosphoheptulonate synthase | PLABR_RS21835 | Not Available | Positive | 5411421 - 5412461 | 37544.7 |
| triose-phosphate isomerase | PLABR_RS21840 | Not Available | Positive | 5412733 - 5413503 | 27201.4 |
| preprotein translocase subunit secg | PLABR_RS25425 | Not Available | Positive | 5413725 - 5414288 | 18412.5 |
| yicc/yloc family endoribonuclease | PLABR_RS21850 | Not Available | Positive | 5414428 - 5415315 | 34016.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
