Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase small subunit | PLABR_RS21605 | Not Available | Positive | 5354935 - 5355504 | 21160.1 |
| ammonia-forming cytochrome c nitrite reductase subunit c552 | PLABR_RS21610 | Not Available | Positive | 5355562 - 5357088 | 57166.9 |
| sulfatase | PLABR_RS21615 | Not Available | Positive | 5357222 - 5358706 | 55381.6 |
| hypothetical protein | PLABR_RS21620 | Not Available | Negative | 5358899 - 5359918 | 38118.8 |
| duf1501 domain-containing protein | PLABR_RS21625 | Not Available | Negative | 5359957 - 5361381 | 52223.9 |
| psd1 and planctomycete cytochrome c domain-containing protein | PLABR_RS21630 | Not Available | Negative | 5361431 - 5364460 | 112379.0 |
| rna polymerase sigma factor | PLABR_RS21635 | Not Available | Positive | 5364692 - 5365924 | 45508.2 |
| voc family protein | PLABR_RS21640 | Not Available | Positive | 5366169 - 5366597 | 15527.5 |
| yybh family protein | PLABR_RS21645 | Not Available | Positive | 5366670 - 5367215 | 20494.1 |
| ycii family protein | PLABR_RS21650 | Not Available | Positive | 5367279 - 5367662 | 14051.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
