Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactonate dehydratase | PLABR_RS21350 | Not Available | Positive | 5284394 - 5285572 | 43508.0 |
| neutral/alkaline non-lysosomal ceramidase n-terminal domain-containing protein | PLABR_RS21355 | Not Available | Positive | 5285572 - 5286969 | 51392.3 |
| dihydrodipicolinate synthase family protein | PLABR_RS21360 | Not Available | Positive | 5286950 - 5287870 | 32879.2 |
| mfs transporter | PLABR_RS21365 | Not Available | Positive | 5287871 - 5289199 | 47962.1 |
| xylose operon transcription regulator xylr | PLABR_RS21370 | Not Available | Negative | 5289263 - 5290429 | 43441.1 |
| duf1611 domain-containing protein | PLABR_RS21375 | Not Available | Positive | 5290672 - 5291760 | 38653.3 |
| dipeptide epimerase | PLABR_RS21380 | Not Available | Positive | 5291757 - 5292788 | 37933.5 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | PLABR_RS21385 | Not Available | Positive | 5292861 - 5293706 | 30330.3 |
| serine hydrolase | PLABR_RS26605 | Not Available | Positive | 5293703 - 5295442 | 64270.9 |
| na+/h+ antiporter nhac family protein | PLABR_RS21395 | Not Available | Positive | 5295525 - 5297381 | 66025.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
