Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamg-like jellyroll fold domain-containing protein | PLABR_RS21145 | Not Available | Negative | 5213564 - 5215087 | 55814.7 |
| sigma-70 family rna polymerase sigma factor | PLABR_RS21150 | Not Available | Negative | 5215084 - 5215620 | 20857.9 |
| duf1501 domain-containing protein | PLABR_RS21155 | Not Available | Negative | 5215638 - 5217104 | 53638.5 |
| psd1 and planctomycete cytochrome c domain-containing protein | PLABR_RS21160 | Not Available | Negative | 5217189 - 5220461 | 122146.0 |
| sugar phosphate isomerase/epimerase family protein | PLABR_RS21165 | Not Available | Negative | 5220596 - 5221441 | 30998.0 |
| gfo/idh/moca family protein | PLABR_RS21170 | Not Available | Negative | 5221438 - 5222607 | 43173.4 |
| dihydrodipicolinate synthase family protein | PLABR_RS21175 | Not Available | Negative | 5222667 - 5223656 | 36756.5 |
| helix-turn-helix transcriptional regulator | PLABR_RS21180 | Not Available | Positive | 5223817 - 5224698 | 32725.0 |
| sigma 54-interacting transcriptional regulator | PLABR_RS21185 | Not Available | Negative | 5224686 - 5226224 | 58898.7 |
| hypothetical protein | PLABR_RS21190 | Not Available | Positive | 5226480 - 5229326 | 103572.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
