Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-c crispr-associated protein cas8c/csd1 | PLABR_RS20625 | Not Available | Negative | 5091956 - 5093722 | 66198.5 |
| type i-c crispr-associated protein cas5c | PLABR_RS20630 | Not Available | Negative | 5093719 - 5094381 | 25707.0 |
| crispr-associated helicase/endonuclease cas3 | PLABR_RS20635 | Not Available | Negative | 5094394 - 5096703 | 86713.3 |
| is5 family transposase | PLABR_RS20640 | Not Available | Positive | 5097350 - 5098090 | 28333.3 |
| hypothetical protein | PLABR_RS20645 | Not Available | Positive | 5098219 - 5098827 | 21780.4 |
| duf1559 domain-containing protein | PLABR_RS20650 | Not Available | Negative | 5099301 - 5100275 | 34876.1 |
| hypothetical protein | PLABR_RS26585 | Not Available | Negative | 5100381 - 5100749 | 13609.1 |
| mota/tolq/exbb proton channel family protein | PLABR_RS25375 | Not Available | Positive | 5101209 - 5101913 | 25580.3 |
| duf2149 domain-containing protein | PLABR_RS20665 | Not Available | Positive | 5101910 - 5102236 | 12029.5 |
| cobaltochelatase subunit cobn | PLABR_RS20670 | Not Available | Positive | 5102223 - 5106371 | 154286.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
