Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family efflux transporter periplasmic adaptor subunit | PLABR_RS20240 | Not Available | Negative | 4979494 - 4981248 | 63881.9 |
| tolc family protein | PLABR_RS20245 | Not Available | Positive | 4981661 - 4983949 | 84151.5 |
| histidine triad nucleotide-binding protein | PLABR_RS20250 | Not Available | Negative | 4983965 - 4984306 | 12325.0 |
| pas domain-containing sensor histidine kinase | PLABR_RS20255 | Not Available | Negative | 4984406 - 4986802 | 89406.0 |
| ytv repeat-containing protein | PLABR_RS20260 | Not Available | Negative | 4987019 - 4988335 | 49924.0 |
| 50s ribosomal protein l27 | PLABR_RS20265 | Not Available | Positive | 4988926 - 4989186 | 9480.24 |
| duf420 domain-containing protein | PLABR_RS20270 | Not Available | Positive | 4989446 - 4989928 | 17970.5 |
| phosphoglucosamine mutase | PLABR_RS20275 | Not Available | Positive | 4990018 - 4991367 | 47986.9 |
| protein kinase domain-containing protein | PLABR_RS20280 | Not Available | Negative | 4991376 - 4996466 | 186843.0 |
| hypothetical protein | PLABR_RS20285 | Not Available | Negative | 4996747 - 5010975 | 470907.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
