Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | PLABR_RS19785 | Not Available | Positive | 4875546 - 4875860 | 12261.4 |
| lamg-like jellyroll fold domain-containing protein | PLABR_RS19790 | Not Available | Negative | 4876134 - 4877945 | 66912.4 |
| carboxymuconolactone decarboxylase family protein | PLABR_RS19795 | Not Available | Negative | 4878121 - 4878654 | 18804.2 |
| thioredoxin | PLABR_RS19800 | Not Available | Positive | 4878921 - 4879250 | 11918.1 |
| rna polymerase sigma factor | PLABR_RS19805 | Not Available | Positive | 4879270 - 4879959 | 25365.2 |
| hypothetical protein | PLABR_RS19810 | Not Available | Positive | 4879971 - 4880246 | 10091.9 |
| efflux rnd transporter periplasmic adaptor subunit | PLABR_RS19815 | Not Available | Negative | 4880353 - 4881801 | 54263.6 |
| trmh family rna methyltransferase | PLABR_RS25330 | Not Available | Positive | 4881953 - 4882726 | 27983.7 |
| cytochrome c oxidase assembly factor coa1 family protein | PLABR_RS19825 | Not Available | Negative | 4883053 - 4883613 | 20062.5 |
| secondary thiamine-phosphate synthase enzyme yjbq | PLABR_RS19830 | Not Available | Negative | 4883657 - 4884088 | 15691.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
