Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rep-associated tyrosine transposase | PLABR_RS19580 | Not Available | Negative | 4820827 - 4821384 | 21607.6 |
| fad-dependent oxidoreductase | PLABR_RS19585 | Not Available | Positive | 4821626 - 4823260 | 58672.9 |
| xylr family transcriptional regulator | PLABR_RS19590 | Not Available | Positive | 4823530 - 4824705 | 44017.3 |
| phosphodiester glycosidase family protein | PLABR_RS19595 | Not Available | Negative | 4824749 - 4825585 | 30095.5 |
| fecr protein | PLABR_RS19600 | Not Available | Negative | 4825709 - 4827424 | 63331.4 |
| sigma-70 family rna polymerase sigma factor | PLABR_RS19605 | Not Available | Negative | 4827421 - 4828038 | 22866.2 |
| phosphodiester glycosidase family protein | PLABR_RS19610 | Not Available | Positive | 4828700 - 4829671 | 35048.9 |
| response regulator transcription factor | PLABR_RS19615 | Not Available | Positive | 4829924 - 4830601 | 25263.6 |
| sensor histidine kinase | PLABR_RS19620 | Not Available | Positive | 4830598 - 4831980 | 50457.8 |
| tolc family protein | PLABR_RS19625 | Not Available | Negative | 4832023 - 4833990 | 70414.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
