Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | PLABR_RS19090 | Not Available | Negative | 4695925 - 4696578 | 24919.7 |
| helix-turn-helix domain-containing protein | PLABR_RS19095 | Not Available | Positive | 4696825 - 4697127 | 11434.6 |
| tyrosine-type recombinase/integrase | PLABR_RS19100 | Not Available | Negative | 4697299 - 4698447 | 43703.4 |
| sulfatase family protein | PLABR_RS19105 | Not Available | Positive | 4698797 - 4700863 | 74384.4 |
| sulfatase | PLABR_RS19110 | Not Available | Negative | 4700970 - 4702376 | 52342.3 |
| intradiol ring-cleavage dioxygenase | PLABR_RS19115 | Not Available | Positive | 4702613 - 4703356 | 27758.9 |
| rho termination factor n-terminal domain-containing protein | PLABR_RS19120 | Not Available | Positive | 4703544 - 4703840 | 11504.5 |
| site-2 protease family protein | PLABR_RS19125 | Not Available | Positive | 4703975 - 4706179 | 83041.4 |
| gaf domain-containing protein | PLABR_RS19130 | Not Available | Positive | 4706285 - 4708315 | 74437.9 |
| preprotein translocase subunit seca | PLABR_RS19135 | Not Available | Positive | 4708364 - 4710247 | 69156.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
