Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional type i 3-dehydroquinate dehydratase/shikimate dehydrogenase | PLABR_RS18455 | Not Available | Negative | 4529785 - 4531227 | 53218.8 |
| dmt family transporter | PLABR_RS18460 | Not Available | Positive | 4531481 - 4532440 | 34443.1 |
| biotin--[acetyl-coa-carboxylase] ligase | PLABR_RS18465 | Not Available | Positive | 4532508 - 4533302 | 28382.7 |
| vwa domain-containing protein | PLABR_RS18470 | Not Available | Negative | 4533330 - 4535672 | 85950.2 |
| hypothetical protein | PLABR_RS18475 | Not Available | Negative | 4535924 - 4537654 | 62329.2 |
| hypothetical protein | PLABR_RS18480 | Not Available | Negative | 4537917 - 4538618 | 25955.0 |
| hypothetical protein | PLABR_RS18485 | Not Available | Positive | 4539115 - 4540695 | 59145.2 |
| rna polymerase sigma factor | PLABR_RS18490 | Not Available | Negative | 4540936 - 4541568 | 23932.9 |
| efflux rnd transporter permease subunit | PLABR_RS18500 | Not Available | Positive | 4542712 - 4545606 | 105767.0 |
| co-chaperone groes | PLABR_RS18505 | Not Available | Positive | 4545855 - 4546223 | 13827.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
