Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | PLABR_RS18150 | Not Available | Positive | 4448535 - 4448999 | 17218.4 |
| hypothetical protein | PLABR_RS18155 | Not Available | Negative | 4448988 - 4449512 | 19889.3 |
| ligase-associated dna damage response exonuclease | PLABR_RS18160 | Not Available | Positive | 4449644 - 4450684 | 38598.1 |
| atp-dependent dna ligase | PLABR_RS18165 | Not Available | Positive | 4450681 - 4452321 | 62524.1 |
| ligase-associated dna damage response dexh box helicase | PLABR_RS18170 | Not Available | Positive | 4452318 - 4454852 | 95265.6 |
| ligase-associated dna damage response endonuclease pdem | PLABR_RS18175 | Not Available | Positive | 4454849 - 4455556 | 26264.7 |
| hd domain-containing phosphohydrolase | PLABR_RS18180 | Not Available | Negative | 4455558 - 4456595 | 38567.2 |
| ammonium transporter | PLABR_RS25245 | Not Available | Negative | 4456637 - 4460458 | 139820.0 |
| hlyd family secretion protein | PLABR_RS18190 | Not Available | Negative | 4460670 - 4461770 | 40680.7 |
| abc transporter atp-binding protein | PLABR_RS18195 | Not Available | Negative | 4461869 - 4462621 | 26674.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
