Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | PLABR_RS16865 | Not Available | Negative | 4128724 - 4129890 | 42817.4 |
| 6-phosphogluconolactonase | PLABR_RS16870 | Not Available | Positive | 4130286 - 4131236 | 35290.7 |
| hypothetical protein | PLABR_RS16875 | Not Available | Positive | 4131348 - 4131695 | 13030.5 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | PLABR_RS16880 | Not Available | Negative | 4131783 - 4133099 | 46573.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | PLABR_RS16885 | Not Available | Negative | 4133208 - 4134722 | 54559.0 |
| alpha/beta fold hydrolase | PLABR_RS16890 | Not Available | Negative | 4134984 - 4135772 | 29876.5 |
| llm class flavin-dependent oxidoreductase | PLABR_RS16895 | Not Available | Negative | 4135862 - 4136896 | 37674.9 |
| hypothetical protein | PLABR_RS16900 | Not Available | Positive | 4136990 - 4137280 | 11110.3 |
| thua domain-containing protein | PLABR_RS16905 | Not Available | Positive | 4137385 - 4138404 | 38184.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | PLABR_RS16910 | Not Available | Positive | 4138584 - 4140425 | 68256.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
