Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLABR_RS01500 | Not Available | Negative | 342669 - 342875 | 8115.98 |
| lysm peptidoglycan-binding domain-containing protein | PLABR_RS27190 | Not Available | Negative | 342875 - 344569 | 61199.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | PLABR_RS01510 | Not Available | Negative | 344713 - 345636 | 33508.3 |
| duf1501 domain-containing protein | PLABR_RS01515 | Not Available | Negative | 345666 - 347096 | 51981.4 |
| psd1 and planctomycete cytochrome c domain-containing protein | PLABR_RS01520 | Not Available | Negative | 347258 - 349678 | 91396.8 |
| threonine--trna ligase | PLABR_RS01525 | Not Available | Negative | 349948 - 352137 | 83022.8 |
| trigger factor | PLABR_RS01530 | Not Available | Negative | 352375 - 353868 | 56446.0 |
| Trna-gly | Not Available | Not Available | Positive | 354028 - 354099 | Not Available |
| hypothetical protein | PLABR_RS01540 | Not Available | Negative | 354503 - 355123 | 22906.1 |
| site-specific tyrosine recombinase xerd | PLABR_RS01545 | Not Available | Positive | 355415 - 356362 | 35842.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
