Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | PLABR_RS15990 | Not Available | Negative | 3880920 - 3884066 | 112331.0 |
| efflux rnd transporter periplasmic adaptor subunit | PLABR_RS15995 | Not Available | Negative | 3884085 - 3885575 | 53827.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | PLABR_RS16000 | Not Available | Negative | 3885723 - 3886379 | 23278.2 |
| secretin n-terminal domain-containing protein | PLABR_RS16005 | Not Available | Positive | 3886958 - 3890911 | 141872.0 |
| gspe/pule family protein | PLABR_RS16010 | Not Available | Positive | 3891005 - 3892699 | 62033.3 |
| type ii secretion system f family protein | PLABR_RS16015 | Not Available | Positive | 3892815 - 3894023 | 44106.5 |
| type ii secretion system major pseudopilin gspg | PLABR_RS16020 | Not Available | Positive | 3894091 - 3894564 | 17466.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PLABR_RS16025 | Not Available | Positive | 3894592 - 3895176 | 21444.6 |
| type ii secretion system protein i/j | PLABR_RS16030 | Not Available | Positive | 3895173 - 3895607 | 16036.4 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PLABR_RS16035 | Not Available | Positive | 3895607 - 3896545 | 33508.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
