Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | PLABR_RS13625 | Not Available | Negative | 3250990 - 3251478 | 18615.7 |
| lactate racemase domain-containing protein | PLABR_RS13635 | Not Available | Negative | 3251836 - 3253089 | 44248.3 |
| gtpase | PLABR_RS24945 | Not Available | Negative | 3253095 - 3254207 | 40404.0 |
| carbamoyl-phosphate synthase large subunit | PLABR_RS13645 | Not Available | Positive | 3254549 - 3257821 | 119975.0 |
| gfo/idh/moca family protein | PLABR_RS13650 | Not Available | Negative | 3258061 - 3259542 | 54976.9 |
| menaquinone biosynthesis family protein | PLABR_RS13655 | Not Available | Positive | 3260061 - 3260912 | 31547.7 |
| l-aspartate oxidase | PLABR_RS13660 | Not Available | Positive | 3261092 - 3262717 | 59329.8 |
| sdr family nad(p)-dependent oxidoreductase | PLABR_RS13665 | Not Available | Positive | 3262802 - 3263581 | 27314.9 |
| chemotaxis protein chex | PLABR_RS24950 | Not Available | Positive | 3263780 - 3264391 | 21550.6 |
| tigr01777 family oxidoreductase | PLABR_RS13675 | Not Available | Negative | 3264504 - 3265892 | 51709.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
