Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | PLABR_RS12630 | Not Available | Negative | 2993947 - 2995128 | 44096.0 |
| kelch repeat type 1-containing protein | PLABR_RS12635 | Not Available | Negative | 2995239 - 2996867 | 59496.4 |
| hypothetical protein | PLABR_RS12640 | Not Available | Negative | 2996904 - 2997146 | 8916.64 |
| duf1559 domain-containing protein | PLABR_RS12645 | Not Available | Negative | 2997269 - 2998240 | 35527.8 |
| hemin uptake protein hemp | PLABR_RS12655 | Not Available | Positive | 2998503 - 2998673 | 6285.58 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | PLABR_RS12660 | Not Available | Negative | 2998872 - 2999924 | 37456.3 |
| pp2c family protein-serine/threonine phosphatase | PLABR_RS12670 | Not Available | Positive | 3000176 - 3001786 | 59501.1 |
| response regulator | PLABR_RS12675 | Not Available | Negative | 3001920 - 3002528 | 22146.1 |
| hypothetical protein | PLABR_RS12685 | Not Available | Positive | 3003148 - 3004122 | 35211.9 |
| flagellar motor switch protein flim | PLABR_RS12690 | Not Available | Negative | 3004332 - 3005438 | 40551.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
