Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--trna ligase/yqey domain fusion protein | PLABR_RS12475 | Not Available | Negative | 2959331 - 2961013 | 64517.9 |
| glutamate--trna ligase | PLABR_RS12480 | Not Available | Negative | 2961124 - 2962707 | 59401.6 |
| dna translocase ftsk | PLABR_RS12490 | Not Available | Positive | 2963194 - 2965740 | 92861.2 |
| metal-dependent hydrolase | PLABR_RS12495 | Not Available | Positive | 2965867 - 2966553 | 24620.1 |
| fmdb family zinc ribbon protein | PLABR_RS12500 | Not Available | Positive | 2966665 - 2966958 | 10917.1 |
| diguanylate cyclase | PLABR_RS24915 | Not Available | Positive | 2967460 - 2969568 | 79569.9 |
| class i sam-dependent methyltransferase | PLABR_RS12510 | Not Available | Positive | 2969717 - 2970448 | 26835.9 |
| gfo/idh/moca family protein | PLABR_RS12515 | Not Available | Negative | 2970464 - 2971777 | 48701.3 |
| arsr/smtb family transcription factor | PLABR_RS12520 | Not Available | Positive | 2972038 - 2972397 | 13468.2 |
| rhodanese-like domain-containing protein | PLABR_RS12525 | Not Available | Positive | 2972487 - 2973029 | 19375.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
