Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | PLABR_RS10725 | Not Available | Negative | 2508087 - 2510999 | 109789.0 |
| hypothetical protein | PLABR_RS10735 | Not Available | Positive | 2511444 - 2512445 | 37099.9 |
| polysaccharide deacetylase family protein | PLABR_RS10740 | Not Available | Positive | 2512450 - 2513481 | 38570.6 |
| lysine--trna ligase | PLABR_RS10745 | Not Available | Positive | 2513744 - 2515246 | 55893.2 |
| abc transporter permease | PLABR_RS10750 | Not Available | Positive | 2515555 - 2517168 | 59076.7 |
| abc transporter atp-binding protein | PLABR_RS10755 | Not Available | Positive | 2517250 - 2517981 | 27504.3 |
| branched-chain-amino-acid transaminase | PLABR_RS10760 | Not Available | Positive | 2518262 - 2519140 | 31995.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | PLABR_RS10765 | Not Available | Positive | 2519578 - 2520366 | 28080.0 |
| mazg nucleotide pyrophosphohydrolase domain-containing protein | PLABR_RS10770 | Not Available | Positive | 2520394 - 2520723 | 12339.8 |
| 30s ribosomal protein s4 | PLABR_RS10775 | Not Available | Negative | 2521253 - 2521861 | 22791.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
