Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | PLABR_RS10325 | Not Available | Negative | 2427406 - 2427873 | 17553.7 |
| translation initiation factor if-1 | PLABR_RS10330 | Not Available | Negative | 2428011 - 2428229 | 8168.98 |
| phytanoyl-coa dioxygenase family protein | PLABR_RS10335 | Not Available | Positive | 2428721 - 2429524 | 30457.0 |
| duf4345 family protein | PLABR_RS10340 | Not Available | Negative | 2429555 - 2429971 | 14952.6 |
| hypothetical protein | PLABR_RS10345 | Not Available | Negative | 2430128 - 2430526 | 14054.6 |
| fdhf/ydep family oxidoreductase | PLABR_RS10350 | Not Available | Negative | 2430695 - 2432869 | 79343.1 |
| 30s ribosomal protein s10 | PLABR_RS10355 | Not Available | Positive | 2433483 - 2433806 | 11910.5 |
| 50s ribosomal protein l3 | PLABR_RS10360 | Not Available | Positive | 2434025 - 2434687 | 23754.7 |
| 50s ribosomal protein l4 | PLABR_RS10365 | Not Available | Positive | 2434788 - 2435441 | 23884.7 |
| 50s ribosomal protein l23 | PLABR_RS10370 | Not Available | Positive | 2435514 - 2435822 | 12053.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
