Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase family protein | PLABR_RS00770 | Not Available | Negative | 197957 - 198778 | 30842.5 |
| ytv repeat-containing protein | PLABR_RS00775 | Not Available | Positive | 199275 - 200735 | 55022.4 |
| sgnh/gdsl hydrolase family protein | PLABR_RS00780 | Not Available | Positive | 201216 - 202088 | 30908.4 |
| s41 family peptidase | PLABR_RS00785 | Not Available | Positive | 202547 - 204253 | 63673.6 |
| hypothetical protein | PLABR_RS00790 | Not Available | Positive | 204265 - 205149 | 31463.7 |
| sigma-70 family rna polymerase sigma factor | PLABR_RS00795 | Not Available | Negative | 205373 - 207100 | 66432.9 |
| 30s ribosomal protein s16 | PLABR_RS27075 | Not Available | Positive | 208733 - 209092 | 13454.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | PLABR_RS00805 | Not Available | Positive | 209183 - 209872 | 26055.9 |
| 50s ribosomal protein l19 | PLABR_RS00810 | Not Available | Positive | 209931 - 210320 | 14763.8 |
| yran family protein | PLABR_RS00815 | Not Available | Positive | 210345 - 210752 | 15266.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
