Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtmp kinase | PLABR_RS08890 | Not Available | Positive | 2090863 - 2091549 | 25594.3 |
| peroxiredoxin | PLABR_RS08895 | Not Available | Negative | 2091531 - 2092010 | 17603.6 |
| diguanylate cyclase domain-containing protein | PLABR_RS08900 | Not Available | Positive | 2092269 - 2093216 | 34895.0 |
| slc13 family permease | PLABR_RS08905 | Not Available | Negative | 2093602 - 2095407 | 64632.1 |
| 3'(2'),5'-bisphosphate nucleotidase | PLABR_RS08910 | Not Available | Negative | 2095447 - 2096442 | 36028.2 |
| glycosyltransferase family 2 protein | PLABR_RS08915 | Not Available | Positive | 2096692 - 2097465 | 28690.3 |
| duf2304 domain-containing protein | PLABR_RS08920 | Not Available | Positive | 2097462 - 2097827 | 13698.2 |
| hypothetical protein | PLABR_RS08925 | Not Available | Negative | 2098175 - 2098768 | 21153.0 |
| rsmb/nop family class i sam-dependent rna methyltransferase | PLABR_RS08930 | Not Available | Negative | 2099107 - 2100594 | 55748.4 |
| peptidase m42 | PLABR_RS08935 | Not Available | Negative | 2100771 - 2101832 | 39203.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
