Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | PLABR_RS08790 | Not Available | Negative | 2067772 - 2068371 | 22042.0 |
| type vi secretion system tube protein hcp | PLABR_RS08795 | Not Available | Negative | 2068444 - 2069490 | 39098.7 |
| type vi secretion system tube protein hcp | PLABR_RS24695 | Not Available | Negative | 2069562 - 2070137 | 20926.7 |
| hcp family type vi secretion system effector | PLABR_RS08805 | Not Available | Negative | 2070229 - 2070753 | 19093.7 |
| type vi secretion system vgr family protein | PLABR_RS08810 | Not Available | Positive | 2071041 - 2073005 | 72402.8 |
| paar domain-containing protein | PLABR_RS08815 | Not Available | Positive | 2073092 - 2073382 | 9503.02 |
| methyltransferase regulatory domain-containing protein | PLABR_RS24700 | Not Available | Negative | 2073401 - 2074999 | 60928.1 |
| hypothetical protein | PLABR_RS24705 | Not Available | Negative | 2075202 - 2076956 | 62878.8 |
| type vi secretion system baseplate subunit tssk | PLABR_RS08830 | Not Available | Positive | 2077357 - 2078793 | 54374.7 |
| dotu family type iv/vi secretion system protein | PLABR_RS08835 | Not Available | Positive | 2078790 - 2079431 | 24072.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
