Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | PLABR_RS08740 | Not Available | Positive | 2055552 - 2057051 | 55645.7 |
| type vi secretion system contractile sheath large subunit | PLABR_RS08745 | Not Available | Positive | 2057243 - 2058856 | 60053.2 |
| type vi secretion system accessory protein tagj | PLABR_RS08750 | Not Available | Positive | 2058888 - 2059688 | 29323.5 |
| type vi secretion system baseplate subunit tsse | PLABR_RS08755 | Not Available | Positive | 2059764 - 2060237 | 17871.5 |
| type vi secretion system baseplate subunit tssf | PLABR_RS08760 | Not Available | Positive | 2060242 - 2062083 | 68848.6 |
| type vi secretion system baseplate subunit tssg | PLABR_RS08765 | Not Available | Positive | 2062080 - 2063180 | 41017.4 |
| type vi secretion system atpase tssh | PLABR_RS08770 | Not Available | Positive | 2063220 - 2065874 | 96280.4 |
| hcp family type vi secretion system effector | PLABR_RS08775 | Not Available | Positive | 2065931 - 2066428 | 17973.0 |
| hypothetical protein | PLABR_RS08780 | Not Available | Positive | 2066511 - 2067002 | 18276.3 |
| type vi secretion system tube protein hcp | PLABR_RS08785 | Not Available | Negative | 2067042 - 2067707 | 24423.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
