Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLABR_RS06235 | Not Available | Positive | 1437051 - 1437824 | 30099.5 |
| pdz domain-containing protein | PLABR_RS06240 | Not Available | Positive | 1437911 - 1438696 | 29779.6 |
| pa14 domain-containing protein | PLABR_RS06245 | Not Available | Positive | 1438921 - 1439385 | 17298.1 |
| c-type cytochrome | PLABR_RS06250 | Not Available | Positive | 1439500 - 1443087 | 130924.0 |
| sugar-binding protein | PLABR_RS06255 | Not Available | Positive | 1443266 - 1444363 | 39527.6 |
| sugar abc transporter atp-binding protein | PLABR_RS06260 | Not Available | Positive | 1444360 - 1445880 | 54981.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | PLABR_RS06265 | Not Available | Positive | 1446175 - 1447665 | 55602.8 |
| nad+ synthase | PLABR_RS06270 | Not Available | Negative | 1448113 - 1449801 | 61129.9 |
| endo-1,4-beta-xylanase | PLABR_RS06275 | Not Available | Negative | 1449908 - 1451389 | 56104.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | PLABR_RS06280 | Not Available | Positive | 1451619 - 1452527 | 33828.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
