Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Rubinisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Rubinisphaera |
| Species | Rubinisphaera brasiliensis |
| Strain | DSM 5305 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water-Marine |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305831 bp
Thymine Count
1310126 bp
Guanine Count
1688094 bp
Cytosine Count
1702551 bp
Genome Length
6006602 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formaldehyde-activating enzyme | PLABR_RS00460 | Not Available | Positive | 110200 - 110697 | 17581.1 |
| bifunctional nadp-dependent methylenetetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase | PLABR_RS00465 | Not Available | Positive | 110915 - 111778 | 30383.5 |
| outer membrane protein assembly factor | PLABR_RS24205 | Not Available | Positive | 112440 - 115634 | 117524.0 |
| carboxylating nicotinate-nucleotide diphosphorylase | PLABR_RS00475 | Not Available | Negative | 116079 - 116984 | 32783.1 |
| (fe-s)-binding protein | PLABR_RS00480 | Not Available | Positive | 117120 - 118454 | 49461.8 |
| hypothetical protein | PLABR_RS00485 | Not Available | Negative | 119132 - 119476 | 11871.2 |
| dna topoisomerase (atp-hydrolyzing) subunit a | PLABR_RS00490 | Not Available | Positive | 119861 - 122218 | 87831.7 |
| dna gyrase/topoisomerase iv subunit b | PLABR_RS00495 | Not Available | Positive | 122317 - 124236 | 70961.7 |
| dctp deaminase | PLABR_RS00500 | Not Available | Positive | 124337 - 124906 | 21944.2 |
| hypothetical protein | PLABR_RS00505 | Not Available | Positive | 125058 - 125642 | 20754.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
